Submitted Work

Lauterbur ME, Heder S, Yohe LR, Dávalos LM. Species tree disequilibrium positively misleads models of gene family evolution. In revision. DOI: 10.1101/2020.01.08.899518

Potter JHT, Yohe LR, Rengifo EM, Sánchez MKR, Portocarrero Harold, Pacheco J, Leveau JR, Tsagkogeorga G, Davies KTJ, Dávalos LM, Rossiter SJ. Comparative transcriptomic patterns correlate with diet and metabolic demands in Neotropical leaf-nosed bats. In revision.

Published

*equal contribution; ºmentored student contribution

[30] Goad D, Nesmelova A, Yohe LR, and Grdzelishvili V. (2023) Intertumoral heterogeneity impacts oncolytic vesicular stomatitis virus efficacy in mouse Pancreatic cancer cells. Journal of Virology. (97)9: . DOI: 0.1128/jvi.01005-23

[29] Yohe LR and Krell NTº. (2023) An updated synthesis of and outstanding questions in the olfactory and vomeronasal systems in bats: genetics asks questions only anatomy can answer. The Anatomical Record. 306(11): 2765-2780. [invited manuscript] DOI: 10.1002/ar.25290

[28] Mutumi GL, Hall RP, Hedrick BP, Yohe LR, Sadier A, Davies KT, Rossiter SJ, Sears KE, Dávalos LM, and Dumont ER. (2023). Disentangling mechanical and sensory modules in the radiation of Noctilionoid bats. The American Naturalist. 202(2): 107-240. DOI: 10.1086/725368

[27] Smith S, Yohe LR*, & Solounias N*. (2023). The bony cap and its distinction from the distal phalanx in humans, cats, and horses. PeerJ, 11, e14352. DOI: 10.7717/peerj.14352

[26] Dornburg A, Mallik R, Wang Z, Bernal MA, Thompson B, Bruford EA, Nebert DW, Vasiliou V, Yohe LR, Yoder JA, and Townsend JP. (2022) Placing human gene families into their evolutionary context. Human Genomics, 16(1): 56. DOI: 10.1186/s40246-022-00429-5

[25] Yohe LR. Fabbri M, Lee Dº, Davies KTJ, Yohe TP, Sanchez MKR, Rengifo E, Hall R, Mutumi G, Hedrick BP, Sadier AA, Simmons NB, Sears KE, Dumont E, Rossiter SJ, Bhullar BAS, and Dávalos LM. (2022) Ecological constraints on highly evolvable olfactory receptor genes and morphology in neotropical bats. Evolution. 76(10): 2347-2360. DOI: 10.1111/evo.14591

[24] Balk MA, Deck J, Emery KF, Walls RL, Reuter D, LaFrance R, Arroyo-Cabrales J, Barrett P, Blois J, Boileau A, Brenskelle L, Cannarozzi NR, Cruz JA, Dávalos LM, de la Sancha NU, Gyawali P, Hantak MM, Hopkins S, Kohli B, King JN, Koo MS, Lawing AM, Machado H, McCrane SM, McLean B, Morgan ME, Pilaar Birch S, Reed D, Reitz EJ, Sewnath N, Upham NS, Villaseñor A, Yohe L, Davis EB, Guralnick, RP. (2022) A solution to the challenges of interdisciplinary aggregation and use of specimen-level trait data, iScience, 25(10): 105101. DOI: 10.1016/j.isci.2022.105101

[23] Yohe LR, Leiser-Miller LB, Kaliszewska ZA, Donat P, Santana SE, Dávalos LM. (2021) Diversity in olfactory receptor repertoires is associated with dietary specialization in a genus of frugivorous bat. G3: Genes, Genomes, Genetics. 11(10): jkab260. DOI: 10.1093/g3journal/jkab260

[22] Potter JHT. Drinkwater R. Davies KTJ. Nesi N. Lim MCW. Yohe LR. Chi H. Zhang X. Levantis I. Lim BK. Witt CW. Tsagkogeorga. dos Reis M. Liu Y. Furey W. Whitley MJ. Aksentijevic D. Dávalos LM. Rossiter SJ. (2021) Nectar-feeding bats and birds show parallel molecular adaptations in sugar metabolism enzymes. Current Biology. 31: 1-8. DOI: 10.1016/j.cub.2021.08.018

[21] Moreno Santillán DD, Lama TM, Gutierrez Guerrero YT, Brown AM, Donat P, Zhao H, Rossiter SJ, Yohe LR, Potter JH, Teeling EC, Vernes SC, Hiller M, Myers E, Hughes GM, Huang Z, Goodwin S, Hoffmann F, Corthals AP, Ray DA, Dávalos LM. (2021) Large-scale genome sampling reveals unique immunity and metabolic adaptations in bats. Molecular Ecology. 30(23): 6449-6467. DOI: 10.1111/mec.16027

​[20] Hall RP, Mutumi GL, Hedrick BP, Yohe LR, Sadier A, Davies KTJ, Rossiter SJ, Sears KE, Davalos LM, Dumont ER. (2021) Find the food first: An omnivorous sensory morphotype predates biomechanical specialization for plant-based diets in phyllostomid bats. Evolution. 75(11): 2791-2801. DOI: doi.org/10.1111/evo.14270

See Evolution digest on this article: doi/10.1111/evo.14343

[19] Smith-Paredes D, Griffith O, Fabbri M, Yohe LR, Blackburn DG, Siler CD, Bhullar BAS, Wagner GP. (2021) Hidden limbs in the "limbless skink" Brachymeles lukbanki: developmental observations. Journal of Anatomy. 239(3): 693-703. DOI: doi.org/10.1111/joa.13447

[18] Potter JHT, Davies KTJ, Yohe LR, Struebig M, Warren K, Tsagkogeorga G, Lim BK, dos Reis M, Dávalos LM, Rossiter SJ. (2021) Dietary diversification and specialization in Neotropical bats facilitated by early molecular evolution. Molecular Biology and Evolution. 38(9): 3864–3883. DOI: 10.1093/molbev/msab028

[17] Syverson DD, Katchinoff J, Yohe LR, Tutulo BM, Seyfried WE, Rooney A. (2021) Osmium partitioning between pyrite and fluid at physiochemical conditions representative of mid-ocean ridge hydrothermal environments. Geochimica et Cosmochimica Acta. 293(15): 240-255. DOI: doi.org/10.1016/j.gca.2020.10.029

[16] Yohe LR, Fabbri M, Hanson M, Bhullar B-AS. (2020) Olfactory gene evolution is unusually rapid across Tetrapoda and outpaces chemosensory phenotypic change. Current Zoology. 66(5): 505-514. [selected for cover] DOI: doi.org/10.1093/cz/zoaa051

[15] Yohe LR and Solounias N. (2020) The five digits of the giraffe metatarsal. Biological Journal of the Linnean Society. 31(3): 699–705. DOI: doi.org/10.1093/biolinnean/blaa136

[14] Davies KTJ, Yohe LR, Alomonte J, Sánchez M, Rengifo E, Dumont E, Sears KE, Dávalos LM, Rossiter SJ. (2020). Foraging shifts and visual preadaptation in ecologically diverse bats. Molecular Ecology. 29(10): 1-21. DOI: https://doi.org/10.1111/mec.15445

[13] Yohe LR, Davies KTJ, Simmons NB, Dumont E, Sears KE, Rossiter SJ, and Dávalos LM. (2019) Evaluating the performance of targeted sequence capture, RNA-Seq, and degenerate-primer PCR cloning for sequencing the largest mammalian multigene family. Molecular Ecology Resources. 00: 1-14. DOI: 10.1111/1755-0998.13093

[12] Yohe LR, Davies KTJ, Rossiter SJ, and Dávalos LM. (2019) Expressed vomeronasal type-1 receptors (V1rs) in bats uncover conserved sequences underlying social chemical signaling. Genome Biology and Evolution. 11(10): 2741–2749. DOI: 10.1093/gbe/evz179/5551330

[11] Yohe LR*, Devanna​ P*, Davies KTJ, Potter JHT, Rossiter SJ, Teeling E, Vernes S# and Dávalos LM#. (2019) Best practices for tissue collection of bats for -omics analyses and primary cell culture. Journal of Visualized Experiments. 152: e59505. DOI: 10.3791/59505

[10] Sadier A, Davies KTJ, Yohe LR, Yun K, Donat P, Hedrick BP, Dumont ER, Dávalos LM, Rossiter SJ, and Sears KE. (2018) Evidence for multifactorial processes underlying phenotypic variation in bat visual opsins. eLife: 7, e37412 DOI: 10.7554/eLife.37412

[9] Yohe LR* and Brand P*. (2018) Evolutionary ecology of chemosensation and its role in sensory drive. Current Zoology. 64(4): 525-533. DOI: 10.1093/cz/zoy048

[8] Yohe LR*, Hoffmann S*, and Curtis A. (2018) Vomeronasal and olfactory structures in bats revealed by diceCT clarify genetic evidence of function. Frontiers in Neuroanatomy. 12(32): 1-13. DOI: 10.3389/fnana.2018.00032

[7] Hedrick BP, Yohe LR, Vander Linden A, Dávalos LM, Sears KE, Sadier A, Rossiter SJ, Davies KTJ, and Dumont E. (2018) Assessing soft-tissue shrinkage estimates in museum specimens imaged With diffusible iodine-based contrast-enhanced computed tomography (diceCT). Microscopy and Microanalysis. (3), 284-291. DOI: 10.1017/S1431927618000399

[6] Yohe LR and Dávalos LM. (2018) Strength of selection on Trpc2 predicts accessory olfactory bulb form in bat vomeronasal evolution. Biological Journal of the Linnean Society. BLY015. DOI: 10.1093/biolinnean/bly015

[5] Yohe LR, Abubakar Rº, Giordano C, Dumont E, Sears K, Rossiter SJ, and Dávalos LM. (2017). Trpc2 pseudogenization dynamics in bats reveal ancestral vomeronasal signaling, then pervasive loss. Evolution. 71(4): 923-935. DOI: 10.1111/evo.13187

[4] Yohe LR, Velazco PM, Rojas D, Gerstner BH, Simmons NB, and Dávalos LM. (2015). Bayesian hierarchical models suggest earliest known plant-visiting bat was omnivorous. Biology Letters. 11(11):20150501. DOI: 10.1098/rsbl.2015.0501

[3] Reddy S, Sharief S, Yohe LR, Witkowski J, Hosner PA, Nyari AS, and Moyle RG. (2015). Untangling taxonomic confusion and diversification patterns of the Streak-breasted Scimitar Babblers (Timaliidae: Pomatorhinus ruficollis complex) in Southern Asia. Molecular Phylogenetics & Evolution. 82(A): 183-192. DOI: 10.1016:j.ympev.2014.10.013

[2] Yohe LR, Flanders J, Duc HM, Vu L, Phung, TB, Nguyen, QH, and Reddy, S. (2014). Unveiling the impact of human influence on species distributions in Vietnam: a case study using babblers (Aves: Timaliidae). Tropical Conservation Science. 7(3): 586-596.
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[1] Yohe LR, Lucas LR, and Suzuki H. (2012) Aggression is suppressed by acute stress but induced by chronic stress: Immobilization effects on aggression, hormones, and cortical 5-HT1B/ striatal dopamine D2 receptor density. Cognitive, Affective, and Behavioral Neuroscience.12(3): 446-59. DOI: 10.3758/s13415-012-0095-9